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- Go to your home directory (or data directory).
- Get the data for the practical from the server (to come data.zip).
- Unpack the input data for the practical.
- Get the demo version of CYANA for this practical (or here CYANA webpage)
- Unpack CYANA.
- Go to the downloaded CYANA folder
- Test whether CYANA can be started by typing, './cyana'.
- If you are a mac user you may need to remove the safety quarantine
- Setup the CYANA environment variables.
- Go to the newly created directory 'data'.
- Test whether CYANA can be started by typing its name, 'cyana'.
- Exit from CYANA by typing 'q' or 'quit'.
cd "path"/cyana-3.98.15
#optional
sudo xattr -rd com.apple.quarantine cyanaexe.macarm-gfortran
cd data
cyana ___________________________________________________________________ CYANA 3.98 (mac-intel) Copyright (c) 2002-17 Peter Guentert. All rights reserved. ___________________________________________________________________ Demo license valid for specific sequences until 2018-12-31 Library file "/Users/deans/cyana-3.98/lib/cyana.lib" read, 41 residue types. *** ERROR: Illegal residue name "LIG". *** ERROR: Cannot read line 114: LIG 333 cyana> q
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