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- Go to your home directory (or data directory).
- Get the data for the practical from the server (JO-data.tgz).
- Unpack the input data for the practical.
- Get the demo version of CYANA for this practical.
- Unpack CYANA.
- Setup the CYANA environment variables.
- Change into the newly created directory 'AUREMN2018'.
- Copy the demo_data directory to 'flyabb'.
- Change into the subdirectory 'flyabb'.
- Test whether CYANA can be started by typing its name, 'cyana'.
- Exit from CYANA by typing 'q' or 'quit'.
- Download Chimera (to your personal laptop) from: Chimera
- Download Avogadro (to your personal laptop) from: Avogadro
cd ~ cp /home/julien/AUREMN2018data.tar.gztgz . tar zxf AUREMN2018data.tar.gztgz wget 'http://www.cyana.org/wiki/images/6/64/Cyana-3.98bin-180213Demo.tgz' tar zxf Cyana-3.98bin-180213Demo.tgz cd cyana-3.98/ ./setup cd ~ cd AUREMN2018 cp -r demo_data flyabb cd flyabb
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